Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase tata/tate family subunit | FE46_RS12765 | Not Available | Positive | 2884372 - 2884548 | 6217.83 |
| tex family protein | FE46_RS12770 | Not Available | Negative | 2884610 - 2886766 | 80693.3 |
| duf1294 domain-containing protein | FE46_RS12775 | Not Available | Positive | 2887039 - 2887311 | 10429.5 |
| cation diffusion facilitator family transporter | FE46_RS12780 | Not Available | Negative | 2887285 - 2888184 | 33985.9 |
| hypothetical protein | FE46_RS12785 | Not Available | Negative | 2888187 - 2888435 | 9559.0 |
| ribose 5-phosphate isomerase b | FE46_RS12790 | Not Available | Negative | 2888482 - 2888910 | 15486.4 |
| ribonuclease r | FE46_RS12795 | Not Available | Positive | 2889749 - 2891923 | 82996.1 |
| head gin domain-containing protein | FE46_RS12800 | Not Available | Positive | 2891932 - 2892603 | 24033.2 |
| lyse family translocator | FE46_RS12805 | Not Available | Positive | 2892712 - 2893395 | 25798.7 |
| Trna-cys | Not Available | Not Available | Positive | 2893439 - 2893512 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
