Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | FE46_RS12420 | Not Available | Positive | 2810668 - 2811696 | 37195.7 |
| rod shape-determining protein mrec | FE46_RS12425 | Not Available | Positive | 2811705 - 2812535 | 31115.5 |
| rod shape-determining protein mred | FE46_RS12430 | Not Available | Positive | 2812528 - 2813034 | 19313.3 |
| penicillin-binding protein 2 | FE46_RS12435 | Not Available | Positive | 2813031 - 2814971 | 72691.9 |
| rod shape-determining protein roda | FE46_RS12440 | Not Available | Positive | 2814972 - 2816228 | 46883.0 |
| dna/rna non-specific endonuclease | FE46_RS12445 | Not Available | Negative | 2816376 - 2817185 | 31325.8 |
| hypothetical protein | FE46_RS12450 | Not Available | Positive | 2817270 - 2817824 | 21233.7 |
| lipoprotein precursor | FE46_RS12455 | Not Available | Negative | 2818030 - 2818437 | 15284.4 |
| lipoprotein precursor | FE46_RS12460 | Not Available | Negative | 2818485 - 2819600 | 43401.5 |
| ig-like domain-containing protein | FE46_RS12465 | Not Available | Negative | 2820076 - 2821677 | 61308.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
