Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor 4 | FE46_RS11510 | Not Available | Positive | 2603296 - 2605092 | 66703.0 |
| regulatory protein recx | FE46_RS11515 | Not Available | Negative | 2605739 - 2606221 | 19305.4 |
| t9ss sorting signal type c domain-containing protein | FE46_RS11525 | Not Available | Positive | 2606352 - 2609270 | 103654.0 |
| recombinase reca | FE46_RS11530 | Not Available | Positive | 2609709 - 2610713 | 36173.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | FE46_RS11535 | Not Available | Negative | 2610758 - 2611504 | 29385.8 |
| tryptophan--trna ligase | FE46_RS11540 | Not Available | Positive | 2611672 - 2612646 | 36730.0 |
| 6-carboxytetrahydropterin synthase | FE46_RS11545 | Not Available | Negative | 2613420 - 2613872 | 17154.4 |
| rna polymerase factor sigma-54 | FE46_RS11550 | Not Available | Negative | 2614604 - 2616070 | 56207.3 |
| asparagine--trna ligase | FE46_RS11555 | Not Available | Negative | 2616162 - 2617598 | 54683.1 |
| rnd family transporter | FE46_RS11560 | Not Available | Negative | 2617837 - 2620260 | 91261.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
