Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | FE46_RS11210 | Not Available | Negative | 2524689 - 2525687 | 37435.0 |
| cytidine deaminase | FE46_RS11215 | Not Available | Negative | 2525830 - 2526312 | 17576.3 |
| type ix secretion system outer membrane channel protein porv | FE46_RS11220 | Not Available | Negative | 2526385 - 2527578 | 43511.8 |
| type ix secretion system sortase poru | FE46_RS11225 | Not Available | Negative | 2527622 - 2531458 | 142046.0 |
| gliding motility lipoprotein gldj | FE46_RS11230 | Not Available | Positive | 2531658 - 2533388 | 65031.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | FE46_RS11235 | Not Available | Negative | 2533825 - 2535108 | 48202.0 |
| hypothetical protein | FE46_RS11240 | Not Available | Positive | 2535534 - 2535869 | 13393.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2536156 - 2536265 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2536420 - 2539306 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2539518 - 2539594 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
