Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | FE46_RS10360 | Not Available | Negative | 2356141 - 2356911 | 28464.7 |
| do family serine endopeptidase | FE46_RS10365 | Not Available | Positive | 2357186 - 2358571 | 49836.6 |
| glyceraldehyde-3-phosphate dehydrogenase | FE46_RS10370 | Not Available | Positive | 2358824 - 2360272 | 53286.5 |
| peptidoglycan endopeptidase | FE46_RS10375 | Not Available | Negative | 2360392 - 2361618 | 46005.4 |
| nif3-like dinuclear metal center hexameric protein | FE46_RS10380 | Not Available | Positive | 2361948 - 2363063 | 41146.5 |
| zinc ribbon domain-containing protein | FE46_RS10385 | Not Available | Positive | 2363066 - 2363845 | 30223.1 |
| alpha/beta hydrolase | FE46_RS10390 | Not Available | Positive | 2363878 - 2364723 | 32137.9 |
| 23s rrna pseudouridine(2604) synthase rluf | FE46_RS10395 | Not Available | Positive | 2364959 - 2365759 | 30830.5 |
| potassium channel family protein | FE46_RS10400 | Not Available | Positive | 2365861 - 2366541 | 25711.0 |
| hypothetical protein | FE46_RS10405 | Not Available | Positive | 2366709 - 2367347 | 24351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
