Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | FE46_RS09270 | Not Available | Negative | 2107123 - 2107641 | 19928.3 |
| Trna-lys | Not Available | Not Available | Positive | 2107769 - 2107841 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2107868 - 2107940 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2107984 - 2108066 | Not Available |
| lycopene cyclase family protein | FE46_RS09290 | Not Available | Negative | 2108380 - 2109522 | 44260.9 |
| merr family transcriptional regulator | FE46_RS09295 | Not Available | Positive | 2109600 - 2110499 | 34959.7 |
| nad(p)/fad-dependent oxidoreductase | FE46_RS09300 | Not Available | Positive | 2110548 - 2112011 | 55533.2 |
| phytoene/squalene synthase family protein | FE46_RS09305 | Not Available | Positive | 2112013 - 2112852 | 32268.7 |
| sterol desaturase family protein | FE46_RS09310 | Not Available | Positive | 2112858 - 2113298 | 17824.0 |
| duf4252 domain-containing protein | FE46_RS09315 | Not Available | Negative | 2113675 - 2114211 | 20219.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
