Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4407 domain-containing protein | FE46_RS00820 | Not Available | Positive | 196210 - 197310 | 41690.9 |
| aminopeptidase p family protein | FE46_RS00825 | Not Available | Positive | 197731 - 199023 | 49749.6 |
| alpha/beta fold hydrolase | FE46_RS00830 | Not Available | Positive | 199136 - 199918 | 29784.0 |
| pd-(d/e)xk nuclease family protein | FE46_RS00835 | Not Available | Negative | 199915 - 202683 | 106375.0 |
| ompa family protein | FE46_RS00840 | Not Available | Negative | 202752 - 204149 | 49401.9 |
| glycine c-acetyltransferase | FE46_RS00845 | Not Available | Negative | 204253 - 205449 | 43620.7 |
| exodeoxyribonuclease v subunit beta | FE46_RS00850 | Not Available | Negative | 205510 - 208668 | 121343.0 |
| superoxide dismutase | FE46_RS00855 | Not Available | Positive | 208934 - 209539 | 22070.0 |
| tyrosine--trna ligase | FE46_RS00860 | Not Available | Negative | 210196 - 211491 | 48047.4 |
| nad-dependent epimerase/dehydratase family protein | FE46_RS00865 | Not Available | Positive | 211645 - 212640 | 37482.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
