Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspc domain-containing protein | FE46_RS07945 | Not Available | Negative | 1833641 - 1835422 | 67301.1 |
| padr family transcriptional regulator | FE46_RS07950 | Not Available | Negative | 1835428 - 1835757 | 12403.0 |
| duf4870 domain-containing protein | FE46_RS07955 | Not Available | Negative | 1835985 - 1836449 | 17477.7 |
| duf4442 domain-containing protein | FE46_RS07960 | Not Available | Positive | 1836640 - 1837092 | 16993.7 |
| tigr01777 family oxidoreductase | FE46_RS07965 | Not Available | Positive | 1837176 - 1838084 | 33963.3 |
| nucleotide exchange factor grpe | FE46_RS07970 | Not Available | Positive | 1838281 - 1838853 | 21749.1 |
| molecular chaperone dnaj | FE46_RS07975 | Not Available | Positive | 1838912 - 1840036 | 40418.0 |
| abc transporter atp-binding protein | FE46_RS07980 | Not Available | Positive | 1840200 - 1841120 | 34730.1 |
| abc transporter permease | FE46_RS07985 | Not Available | Positive | 1841208 - 1842512 | 48700.6 |
| sigma-54 dependent transcriptional regulator | FE46_RS07990 | Not Available | Positive | 1842710 - 1843873 | 43452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
