Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 1435456 - 1436967 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1437073 - 1437146 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1437308 - 1437381 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1437596 - 1440482 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1440637 - 1440746 | Not Available |
| duf6770 family protein | FE46_RS06250 | Not Available | Negative | 1441824 - 1443284 | 57229.0 |
| m48 family metallopeptidase | FE46_RS06255 | Not Available | Negative | 1443281 - 1444588 | 51963.9 |
| is982 family transposase | FE46_RS13685 | Not Available | Negative | 1444752 - 1445380 | 22836.4 |
| excinuclease abc subunit uvrb | FE46_RS06265 | Not Available | Positive | 1445560 - 1447551 | 76226.4 |
| hypothetical protein | FE46_RS06270 | Not Available | Negative | 1447548 - 1447949 | 15676.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
