Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | FE46_RS05345 | Not Available | Positive | 1241235 - 1242425 | 43832.7 |
| cytochrome c | FE46_RS05350 | Not Available | Positive | 1242652 - 1242939 | 10626.4 |
| sigma-54 dependent transcriptional regulator | FE46_RS05355 | Not Available | Positive | 1243175 - 1244518 | 50758.3 |
| hypothetical protein | FE46_RS05360 | Not Available | Positive | 1244682 - 1244963 | 10491.8 |
| k(+)-transporting atpase subunit f | FE46_RS13780 | Not Available | Positive | 1245336 - 1245413 | 2860.74 |
| potassium-transporting atpase subunit kdpa | FE46_RS05370 | Not Available | Positive | 1245530 - 1247251 | 62179.6 |
| potassium-transporting atpase subunit kdpb | FE46_RS05375 | Not Available | Positive | 1247352 - 1249385 | 72037.4 |
| k(+)-transporting atpase subunit c | FE46_RS05380 | Not Available | Positive | 1249438 - 1249992 | 20029.4 |
| porin | FE46_RS05385 | Not Available | Positive | 1250278 - 1251354 | 39971.3 |
| two-component system sensory protein | FE46_RS05390 | Not Available | Positive | 1251483 - 1252610 | 42650.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
