Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | FE46_RS05090 | Not Available | Positive | 1181759 - 1182415 | 25473.1 |
| thif family adenylyltransferase | FE46_RS05095 | Not Available | Positive | 1182509 - 1183219 | 25979.0 |
| effector binding domain-containing protein | FE46_RS05100 | Not Available | Negative | 1183227 - 1184255 | 38896.5 |
| hypothetical protein | FE46_RS05105 | Not Available | Negative | 1184319 - 1184546 | 8940.64 |
| nucleoside triphosphate pyrophosphohydrolase family protein | FE46_RS05110 | Not Available | Positive | 1184754 - 1185140 | 14521.5 |
| branched-chain amino acid aminotransferase | FE46_RS05115 | Not Available | Negative | 1185217 - 1186284 | 39856.9 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | FE46_RS05120 | Not Available | Positive | 1186530 - 1187195 | 25592.9 |
| hypothetical protein | FE46_RS05125 | Not Available | Positive | 1187271 - 1187468 | 7831.73 |
| lysr substrate-binding domain-containing protein | FE46_RS05130 | Not Available | Negative | 1187695 - 1188636 | 35520.9 |
| letm1-related biofilm-associated protein | FE46_RS05135 | Not Available | Negative | 1188698 - 1189894 | 46328.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
