Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain MGH152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1136715 bp
Thymine Count
1139030 bp
Guanine Count
1222224 bp
Cytosine Count
1224938 bp
Genome Length
4755250 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
202 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-arginine-ornithine-binding periplasmic protein | AZ013_000338 | Not Available | Negative | 364448 - 365230 | 28147.3 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein | AZ013_000339 | Not Available | Negative | 365518 - 366087 | 20635.2 |
| lysine-specific permease | AZ013_000340 | Not Available | Negative | 366084 - 367550 | 53546.7 |
| hypothetical protein | AZ013_000341 | Not Available | Negative | 367617 - 368720 | 40904.5 |
| amino acid transporter | AZ013_000342 | Not Available | Negative | 368722 - 370143 | 51674.8 |
| diaminopimelate decarboxylase | AZ013_000343 | Not Available | Negative | 370238 - 371635 | 52778.5 |
| sigma(54)-dependent activator | AZ013_000344 | Not Available | Positive | 371705 - 373276 | 58946.1 |
| amidophosphoribosyltransferase | AZ013_000345 | Not Available | Negative | 373312 - 374829 | 56464.4 |
| colicin v production protein | AZ013_000346 | Not Available | Negative | 374863 - 375351 | 18021.2 |
| dedd protein | AZ013_000347 | Not Available | Negative | 375572 - 376246 | 23140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

