Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain MGH152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1136715 bp
Thymine Count
1139030 bp
Guanine Count
1222224 bp
Cytosine Count
1224938 bp
Genome Length
4755250 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
202 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0394 inner membrane protein yede | AZ013_004408 | Not Available | Positive | 4687500 - 4688705 | 44379.4 |
| hypothetical protein | AZ013_004409 | Not Available | Positive | 4688702 - 4688935 | 8639.5 |
| hypothetical protein | AZ013_004410 | Not Available | Positive | 4689225 - 4690511 | 48665.2 |
| hypothetical protein | AZ013_004411 | Not Available | Positive | 4690515 - 4690631 | 4615.45 |
| flagellar hook-basal body complex protein flie | AZ013_004412 | Not Available | Negative | 4690601 - 4690915 | 11190.6 |
| flagellar m-ring protein | AZ013_004413 | Not Available | Positive | 4691132 - 4692811 | 61362.6 |
| flagellar motor switch protein flig | AZ013_004414 | Not Available | Positive | 4692804 - 4693799 | 36852.3 |
| flagellar assembly protein flih | AZ013_004415 | Not Available | Positive | 4693792 - 4694499 | 25938.5 |
| flagellum-specific atp synthase | AZ013_004416 | Not Available | Positive | 4694499 - 4695869 | 49233.5 |
| flagellar flij protein | AZ013_004417 | Not Available | Positive | 4695891 - 4696334 | 17301.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

