Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain MGH152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1136715 bp
Thymine Count
1139030 bp
Guanine Count
1222224 bp
Cytosine Count
1224938 bp
Genome Length
4755250 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
202 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein ydiq | AZ013_003627 | Not Available | Negative | 3906641 - 3907405 | 27515.2 |
| transcriptional regulator | AZ013_003628 | Not Available | Positive | 3907915 - 3908805 | 34200.5 |
| acyl-coa dehydrogenase | AZ013_003629 | Not Available | Negative | 3908860 - 3910011 | 42921.4 |
| acetate coa-transferase ydif | AZ013_003630 | Not Available | Negative | 3910025 - 3911620 | 57274.1 |
| 3-dehydroquinate dehydratase | AZ013_003631 | Not Available | Negative | 3911777 - 3912535 | 27408.3 |
| quinate/shikimate dehydrogenase | AZ013_003632 | Not Available | Negative | 3912570 - 3913436 | 31371.9 |
| inner membrane transporter ydin | AZ013_003633 | Not Available | Negative | 3913458 - 3914693 | 44772.5 |
| inner membrane transporter ydim | AZ013_003634 | Not Available | Negative | 3914936 - 3916156 | 44203.1 |
| hypothetical protein | AZ013_003635 | Not Available | Negative | 3916303 - 3916659 | 13677.4 |
| upf0118 inner membrane protein ydik | AZ013_003636 | Not Available | Negative | 3917151 - 3918260 | 39631.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

