Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain MGH152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1136715 bp
Thymine Count
1139030 bp
Guanine Count
1222224 bp
Cytosine Count
1224938 bp
Genome Length
4755250 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
202 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase linking lpp to murein | AZ013_003487 | Not Available | Negative | 3763996 - 3764961 | 34689.1 |
| transcription-repair-coupling factor | AZ013_003488 | Not Available | Negative | 3765110 - 3768556 | 129972.0 |
| inner membrane protein ycft | AZ013_003489 | Not Available | Negative | 3768675 - 3769778 | 41971.6 |
| lipoprotein-releasing system transmembrane protein lolc | AZ013_003490 | Not Available | Positive | 3769909 - 3771198 | 46884.9 |
| lipoprotein-releasing system atp-binding protein lold | AZ013_003491 | Not Available | Positive | 3771191 - 3771892 | 25433.8 |
| lipoprotein-releasing system transmembrane protein lole | AZ013_003492 | Not Available | Positive | 3771892 - 3773136 | 45103.5 |
| n-acetyl-d-glucosamine kinase | AZ013_003493 | Not Available | Positive | 3773180 - 3774091 | 33034.5 |
| nad-dependent protein deacylase | AZ013_003494 | Not Available | Positive | 3774107 - 3774928 | 30897.1 |
| spermidine/putrescine-binding periplasmic protein | AZ013_003495 | Not Available | Negative | 3775028 - 3776077 | 39141.4 |
| spermidine/putrescine transport system permease potc | AZ013_003496 | Not Available | Negative | 3776102 - 3776851 | 27424.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

