Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain MGH152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1136715 bp
Thymine Count
1139030 bp
Guanine Count
1222224 bp
Cytosine Count
1224938 bp
Genome Length
4755250 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
202 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt transporter cbin | AZ013_003457 | Not Available | Positive | 3736176 - 3736457 | 10273.4 |
| cobalt transporter cbiq | AZ013_003458 | Not Available | Positive | 3736444 - 3737121 | 25998.9 |
| cobalt import atp-binding protein cbio | AZ013_003459 | Not Available | Positive | 3737130 - 3737945 | 30074.2 |
| cobyric acid synthase | AZ013_003460 | Not Available | Positive | 3737942 - 3739462 | 55215.6 |
| bifunctional adenosylcobalamin biosynthesis protein cobu | AZ013_003461 | Not Available | Positive | 3739459 - 3740004 | 20041.1 |
| cobalamin synthase | AZ013_003462 | Not Available | Positive | 3740001 - 3740744 | 26238.3 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | AZ013_003463 | Not Available | Positive | 3740769 - 3741833 | 36359.6 |
| l,d-transpeptidase linking lpp to murein | AZ013_003464 | Not Available | Positive | 3741952 - 3742878 | 33768.6 |
| abc transporter | AZ013_003465 | Not Available | Negative | 3742902 - 3743591 | 25416.8 |
| hypothetical protein | AZ013_003466 | Not Available | Negative | 3743602 - 3745290 | 60448.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

