Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain MGH152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1136715 bp
Thymine Count
1139030 bp
Guanine Count
1222224 bp
Cytosine Count
1224938 bp
Genome Length
4755250 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
202 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein fimd | AZ013_002907 | Not Available | Positive | 3121857 - 3124478 | 95620.7 |
| protein fimh | AZ013_002908 | Not Available | Positive | 3124480 - 3125490 | 36518.4 |
| fimbrial-like protein fimf | AZ013_002909 | Not Available | Positive | 3125483 - 3126019 | 18978.7 |
| fimbriae z protein | AZ013_002910 | Not Available | Negative | 3126070 - 3126702 | 23652.9 |
| hypothetical protein | AZ013_002911 | Not Available | Negative | 3127292 - 3128014 | 28225.4 |
| hypothetical protein | AZ013_002912 | Not Available | Negative | 3128038 - 3128766 | 27592.1 |
| hypothetical protein | AZ013_002913 | Not Available | Negative | 3128934 - 3129527 | 23028.1 |
| hypothetical protein | AZ013_002914 | Not Available | Positive | 3129564 - 3129743 | 6845.44 |
| Trna-arg | Not Available | Not Available | Positive | 3129783 - 3129859 | Not Available |
| transposase insg for insertion sequence element is4 | AZ013_002916 | Not Available | Positive | 3130052 - 3130327 | 10202.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

