Geobacter metallireducens GS-15

Gram-negativeBacilliMotileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geobacter

Description

Geobacter metallireducens GS-15 is a Gram-negative, bacilli-shaped bacterium that thrives in aquatic habitats. As a chemolithotroph, it utilizes inorganic compounds as an energy source, specifically in anaerobic conditions, which is critical for its survival and metabolic processes. This organism exhibits a free-living biotic relationship and is nonpathogenic, making it a suitable candidate for studying environmental and bioremediation applications. G. metallireducens GS-15 is characterized by its single-cell arrangement and possesses flagella, which contributes to its mobility in the aquatic environment. The bacterium is mesophilic, with an optimal growth temperature of 30°C, and it operates efficiently within a specific temperature range suited to its metabolic needs. The genomic structure of G. metallireducens GS-15 reveals a single replicon and a double-membrane system, which is typical for Gram-negative bacteria. The strain has been cataloged in biological databases, with the accession number NC_007515.1, providing a reference for further research. Ecologically, G. metallireducens GS-15 plays a significant role in biogeochemical cycles, particularly in the reduction of metals and the degradation of organic pollutants in anaerobic environments. Its ability to thrive in oxygen-deprived conditions and utilize inorganic substrates positions it as a crucial player in nutrient cycling and environmental remediation efforts, highlighting its potential applications in bioremediation technologies.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeobacter
SpeciesGeobacter metallireducens
StrainGS-15

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Geobacter metallireducens GS-15
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemolithotroph
PathogenicityNo

Genome Summary

Geobacter metallireducens GS-15 plasmid unnamed, complete

Gene Summary

Adenine Count

2890 bp

Thymine Count

3650 bp

Guanine Count

3616 bp

Cytosine Count

3606 bp

Genome Length

13762 bp

Protein-coding Genes

16 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication protein repaGMET_RS17960Not AvailableNegative963 - 206341868.0
hypothetical proteinGMET_RS17965Not AvailableNegative2067 - 237811882.8
is4-like element isgme2 family transposaseGMET_RS17970Not AvailableNegative2393 - 356245352.2
hypothetical proteinGMET_RS17975Not AvailableNegative3862 - 40717762.13
hypothetical proteinGMET_RS17980Not AvailableNegative4068 - 440912516.2
hypothetical proteinGMET_RS17985Not AvailableNegative4575 - 47848065.32
type ii toxin-antitoxin system rele family toxinGMET_RS17990Not AvailableNegative4781 - 505310607.9
duf6290 family proteinGMET_RS17995Not AvailableNegative5037 - 52618608.32
hypothetical proteinGMET_RS18000Not AvailableNegative5321 - 580917957.5
hypothetical proteinGMET_RS18005Not AvailableNegative6011 - 61966496.25

Displaying genes 1 – 10 of 16 in total

Metabolites

1810 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 1810 metabolites

Health Effects

No health effects information available for this bacterium.