Flavobacterium fryxellicola strain DSM 16209 FBFR49

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium fryxellicola strain DSM 16209 FBFR49 is a Gram-negative, non-motile rod-shaped bacterium. This strain exhibits psychrotolerant characteristics, with an optimal growth temperature of 16°C, allowing it to thrive in cooler environments. The presence of flagella, despite its non-motility, may suggest a potential for movement in specific contexts, although its exact role in the ecology of this bacterium remains unspecified. The strain is characterized by having a single replicon, which is relevant for its genetic stability and replication process. Its genetic information can be accessed through the accession number LVJE00000000.1, providing a basis for further genomic studies and comparisons with other members of the Flavobacterium genus. Ecologically, Flavobacterium fryxellicola has the potential to play a role in cold environments, possibly contributing to nutrient cycling and organic matter decomposition in psychrophilic ecosystems. Its ability to thrive at low temperatures positions it as a significant player in cold-water habitats, where it may interact with other microbial communities and influence the overall biogeochemical processes in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium fryxellicola
Strainstrain DSM 16209 FBFR49

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium fryxellicola strain DSM 16209 FBFR49
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium fryxellicola strain DSM 16209 FBFR49


Gene Summary

Adenine Count

1219993 bp

Thymine Count

1214010 bp

Guanine Count

631700 bp

Cytosine Count

655302 bp

Genome Length

3721009 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl transferaseFBFR_00005Not AvailablePositive138 - 111836989.2
16s ribosomal rnaNot AvailableNot AvailablePositive628 - 2145Not Available
tyrosine--trna ligaseFBFR_00010A6GW04Negative1139 - 243148254.6
nad-dependent epimeraseFBFR_00015Not AvailablePositive2527 - 351637443.0
23s ribosomal rnaNot AvailableNot AvailablePositive2801 - 5691Not Available
hypothetical proteinFBFR_00020Not AvailableNegative3529 - 395416384.2
dihydroorotaseFBFR_00025Q9UXV6Negative3966 - 530649802.7
dolichyl-phosphate beta-d-mannosyltransferaseFBFR_00030A0QZ12Negative5319 - 604427819.8
hypothetical proteinFBFR_00035Not AvailablePositive6148 - 681926298.5
uroporphyrinogen-iii synthaseFBFR_00040Not AvailablePositive6832 - 758128629.7

Displaying genes 1 – 10 of 3183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

175 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 175 metabolites

Health Effects

No health effects information available for this bacterium.