Flavobacterium fryxellicola strain DSM 16209 FBFR49

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium fryxellicola strain DSM 16209 FBFR49 is a Gram-negative, rod-shaped bacterium characterized by its optimal growth temperature of 16.0°C. This strain is part of the diverse genus Flavobacterium, which is known for its role in various ecological niches, particularly in aquatic environments. The Gram-negative nature of F. fryxellicola indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, a characteristic that often contributes to the organism's adaptability to different environmental conditions. The rod shape of the bacterium is typical of many members of the Flavobacteriaceae family and may facilitate motility and nutrient uptake in its habitat. At an optimal growth temperature of 16.0°C, F. fryxellicola is likely adapted to cooler environments, suggesting a potential role in biogeochemical processes in cold aquatic systems. This temperature preference also indicates that the strain may be an important player in microbial communities that thrive in temperate or polar regions, where it could contribute to the degradation of organic matter and the cycling of nutrients. Overall, Flavobacterium fryxellicola strain DSM 16209 FBFR49 exemplifies the ecological versatility of Flavobacterium species, potentially influencing aquatic ecosystems by participating in the breakdown of organic compounds at lower temperatures.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium fryxellicola
Strainstrain DSM 16209 FBFR49

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Flavobacterium fryxellicola strain DSM 16209 FBFR49
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium fryxellicola strain DSM 16209 FBFR49


Gene Summary

Adenine Count

1219993 bp

Thymine Count

1214010 bp

Guanine Count

631700 bp

Cytosine Count

655302 bp

Genome Length

3721009 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
acyl transferaseFBFR_00005Not Available+138 - 111836989.2
16s ribosomal rnaNot AvailableNot Available+628 - 2145Not Available
tyrosine--trna ligaseFBFR_00010A6GW04-1139 - 243148254.6
nad-dependent epimeraseFBFR_00015Not Available+2527 - 351637443.0
23s ribosomal rnaNot AvailableNot Available+2801 - 5691Not Available
hypothetical proteinFBFR_00020Not Available-3529 - 395416384.2
dihydroorotaseFBFR_00025Q9UXV6-3966 - 530649802.7
dolichyl-phosphate beta-d-mannosyltransferaseFBFR_00030A0QZ12-5319 - 604427819.8
hypothetical proteinFBFR_00035Not Available+6148 - 681926298.5
uroporphyrinogen-iii synthaseFBFR_00040Not Available+6832 - 758128629.7

Displaying genes 1 – 10 of 3183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

175 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 175 metabolites