Lutibacter agarilyticus strain DSM 29150

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Lutibacter

Description

Lutibacter agarilyticus strain DSM 29150 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is mesophilic, with an optimal growth temperature of 25°C, which positions it within a temperature range conducive to growth in moderate environmental conditions. Lutibacter agarilyticus has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in specific ecological niches. Notably, this strain does not form spores, which may reflect its ecological strategy to thrive in stable environments rather than those requiring resilience against harsh conditions. The absence of motility and the aerobic requirement suggest that Lutibacter agarilyticus may occupy specific microhabitats where oxygen is readily available, potentially engaging in interactions with other microbial populations in its ecosystem. The traits of Lutibacter agarilyticus, including its Gram-negative cell wall structure and non-spore-forming nature, may influence its ecological roles, such as nutrient cycling and decomposition processes. In summary, Lutibacter agarilyticus strain DSM 29150 exemplifies a specialized bacterium adapted to aerobic conditions, and its growth characteristics may play a significant role in its ecological environment, particularly in habitats that support mesophilic organisms. Understanding its specific interactions within microbial communities could provide insights into its functional contributions to ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLutibacter
SpeciesLutibacter agarilyticus
Strainstrain DSM 29150

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lutibacter agarilyticus strain DSM 29150


Gene Summary

Adenine Count

1404523 bp

Thymine Count

1415865 bp

Guanine Count

635413 bp

Cytosine Count

645632 bp

Genome Length

4101932 bp

Protein-coding Genes

3396 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive42 - 15218.01
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive303 - 318718.01
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN06265371_1011Not AvailablePositive589 - 249071858.7
polysaccharide export outer membrane proteinSAMN06265371_1012Not AvailablePositive2583 - 334427723.3
capsular exopolysaccharide familySAMN06265371_1013Not AvailablePositive3355 - 571288308.7
16s ribosomal rna . bacterial ssuNot AvailableNot AvailablePositive3707 - 523018.01
tyrosine-protein phosphatase ywqeSAMN06265371_1014Not AvailableNegative5955 - 669828483.5
capsule assembly protein wziSAMN06265371_1015Not AvailableNegative6738 - 820154865.4
uncharacterised nucleotidyltransferaseSAMN06265371_1016Not AvailableNegative8838 - 991142337.6
hypothetical proteinSAMN06265371_1017Not AvailableNegative10013 - 102137309.83

Displaying genes 1 – 10 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.