Lutibacter agarilyticus strain DSM 29150

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Lutibacter

Description

Lutibacter agarilyticus strain DSM 29150 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, with an optimal growth temperature of 25.0°C. This strain is notable for its non-spore-forming nature, which distinguishes it from many other bacterial species that utilize sporulation as a means of survival in unfavorable conditions. As a member of its genus, Lutibacter agarilyticus may be involved in specific ecological interactions, particularly in environments rich in organic matter. Its aerobic metabolism suggests a potential role in the degradation of complex organic substances, contributing to nutrient cycling within its habitat. The optimal temperature of 25.0°C indicates a preference for moderate environmental conditions, which may align with its isolation from temperate ecosystems. The physiological traits of Lutibacter agarilyticus strain DSM 29150 underscore its potential utility in biotechnological applications, particularly in the biodegradation of pollutants or organic waste materials in aerobic treatment processes. Further research into its metabolic capabilities could reveal specific pathways utilized for organic matter degradation, enhancing our understanding of its ecological role in aerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLutibacter
SpeciesLutibacter agarilyticus
Strainstrain DSM 29150

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lutibacter agarilyticus strain DSM 29150


Gene Summary

Adenine Count

1404523 bp

Thymine Count

1415865 bp

Guanine Count

635413 bp

Cytosine Count

645632 bp

Genome Length

4101932 bp

Protein-coding Genes

3396 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rna . bacterial tsuNot AvailableNot Available+42 - 15218.01
23s ribosomal rna . bacterial lsuNot AvailableNot Available+303 - 318718.01
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN06265371_1011Not Available+589 - 249071858.7
polysaccharide export outer membrane proteinSAMN06265371_1012Not Available+2583 - 334427723.3
capsular exopolysaccharide familySAMN06265371_1013Not Available+3355 - 571288308.7
16s ribosomal rna . bacterial ssuNot AvailableNot Available+3707 - 523018.01
tyrosine-protein phosphatase ywqeSAMN06265371_1014Not Available-5955 - 669828483.5
capsule assembly protein wziSAMN06265371_1015Not Available-6738 - 820154865.4
uncharacterised nucleotidyltransferaseSAMN06265371_1016Not Available-8838 - 991142337.6
hypothetical proteinSAMN06265371_1017Not Available-10013 - 102137309.83

Displaying genes 1 – 10 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites