Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain ACV-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855782 bp
Thymine Count
828914 bp
Guanine Count
555293 bp
Cytosine Count
522088 bp
Genome Length
2764267 bp
Protein-coding Genes
2522 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hypd | SAMN02910377_00077 | Not Available | Positive | 79043 - 80086 | 37475.1 |
| hydrogenase expression/formation protein hype | SAMN02910377_00078 | Not Available | Positive | 80101 - 81102 | 35454.3 |
| two-component system, chemotaxis family, response regulator chey | SAMN02910377_00079 | Not Available | Positive | 81227 - 81610 | 13869.8 |
| putative n6-adenine-specific dna methylase | SAMN02910377_00080 | Not Available | Positive | 81933 - 83120 | 45149.3 |
| cysteine protease, c1a family | SAMN02910377_00081 | Not Available | Positive | 83125 - 84864 | 64308.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN02910377_00082 | Not Available | Positive | 84881 - 85927 | 38352.4 |
| xtp/ditp diphosphohydrolase | SAMN02910377_00083 | Not Available | Positive | 85950 - 86561 | 22550.6 |
| hypothetical protein | SAMN02910377_00084 | Not Available | Positive | 86542 - 87045 | 18967.2 |
| uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domain | SAMN02910377_00085 | Not Available | Positive | 87035 - 88552 | 54274.3 |
| protein of unknown function | SAMN02910377_00086 | Not Available | Negative | 88549 - 89772 | 46483.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
