Pseudobutyrivibrio ruminis DSM 9787

Gram-positiveMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio ruminis DSM 9787 is a Gram-positive, non-sporulating bacterium classified as a chemoheterotroph, thriving in anaerobic environments, particularly within the intestinal microflora of animals. This microbe demonstrates an optimal growth temperature of 39.0°C, aligning with the physiological conditions typically found in the host's gastrointestinal tract. As a member of the gut microbiota, P. ruminis plays a crucial role in the fermentation of complex carbohydrates, contributing to the overall metabolic processes within the animal intestines. Its anaerobic nature indicates that it relies on fermentation pathways to obtain energy, which is essential for maintaining a balanced gut ecosystem. The presence of P. ruminis in the intestinal flora can influence nutrient absorption and the production of short-chain fatty acids, which are vital for host health. Understanding the specific functions and interactions of Pseudobutyrivibrio ruminis within the gut microbiota can provide insights into its potential contributions to host metabolism and the implications of microbial dysbiosis in animal health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio ruminis
StrainDSM 9787

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature39
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio ruminis DSM 9787


Gene Summary

Adenine Count

905383 bp

Thymine Count

941599 bp

Guanine Count

563383 bp

Cytosine Count

610013 bp

Genome Length

3020378 bp

Protein-coding Genes

2726 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinSAMN02910411_0600Not Available-974 - 125210725.8
hypothetical proteinSAMN02910411_0601Not Available+1440 - 231232686.8
acylphosphataseSAMN02910411_0602Not Available+2607 - 288810689.7
putative abc transport system atp-binding proteinSAMN02910411_0603Not Available+3073 - 378025681.8
putative abc transport system permease proteinSAMN02910411_0604Not Available+3782 - 620890881.9
16s rrna processing protein rimmSAMN02910411_0605Not Available+6288 - 680619425.2
trna (guanine37-n1)-methyltransferaseSAMN02910411_0606Not Available+6808 - 750626306.2
large subunit ribosomal protein l19SAMN02910411_0607Not Available+7612 - 796213196.0
signal peptidase iSAMN02910411_0608Not Available+8061 - 865722586.1
ribosome biogenesis gtpase aSAMN02910411_0609Not Available+8670 - 950931369.0

Displaying genes 1 – 10 of 2795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

235 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 235 metabolites