Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 355446 - 355473 | Not Available |
| Integrase | CSX01_01805 | Not Available | + | 365996 - 367366 | 53255.3 |
| hypothetical protein | CSX01_01810 | Not Available | + | 367621 - 367884 | 9457.46 |
| Putative peptidoglycan-binding protein | CSX01_01815 | Not Available | - | 368016 - 368741 | 26273.7 |
| Holin | CSX01_01820 | Not Available | - | 368738 - 369259 | 18757.3 |
| hypothetical protein | CSX01_01825 | Not Available | - | 369408 - 369659 | 9534.22 |
| Reverse transcriptase | CSX01_01830 | Not Available | - | 369672 - 370859 | 46574.3 |
| hypothetical protein | CSX01_01835 | Not Available | - | 371120 - 371587 | 18383.3 |
| Tail protein | CSX01_01840 | Not Available | - | 371657 - 373162 | 53863.4 |
| Xkdu-like tail protein | CSX01_01845 | Not Available | - | 373166 - 373807 | 23944.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
