Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain ACV-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855782 bp
Thymine Count
828914 bp
Guanine Count
555293 bp
Cytosine Count
522088 bp
Genome Length
2764267 bp
Protein-coding Genes
2522 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN02910377_02556 | Not Available | Negative | 2718255 - 2719634 | 49850.2 |
| d-alanine-d-alanine ligase | SAMN02910377_02557 | Not Available | Negative | 2719659 - 2720699 | 37892.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910377_02558 | Not Available | Negative | 2720787 - 2721665 | 33966.0 |
| putative sigma-54 modulation protein | SAMN02910377_02559 | Not Available | Negative | 2721761 - 2722294 | 20627.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN02910377_02560 | Not Available | Positive | 2722527 - 2723258 | 25790.2 |
| hpt domain-containing protein | SAMN02910377_02561 | Not Available | Negative | 2723259 - 2723876 | 23444.3 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN02910377_02562 | Not Available | Negative | 2723887 - 2724852 | 36857.3 |
| hypothetical protein | SAMN02910377_02563 | Not Available | Positive | 2724942 - 2726336 | 52832.7 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN02910377_02564 | Not Available | Positive | 2726320 - 2727609 | 47920.1 |
| hypothetical protein | SAMN02910377_02565 | Not Available | Positive | 2727619 - 2727891 | 10582.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
