Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain ACV-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855782 bp
Thymine Count
828914 bp
Guanine Count
555293 bp
Cytosine Count
522088 bp
Genome Length
2764267 bp
Protein-coding Genes
2522 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910377_02535 | Not Available | Positive | 2700336 - 2700806 | 17760.1 |
| hypothetical protein | SAMN02910377_02536 | Not Available | Positive | 2700861 - 2701361 | 18942.0 |
| helix-turn-helix | SAMN02910377_02537 | Not Available | Negative | 2701594 - 2701935 | 12821.4 |
| addiction module antidote protein, higa family | SAMN02910377_02538 | Not Available | Positive | 2702445 - 2702735 | 11255.8 |
| hypothetical protein | SAMN02910377_02539 | Not Available | Positive | 2703030 - 2703155 | 4864.18 |
| uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) family | SAMN02910377_02540 | Not Available | Negative | 2703187 - 2703579 | 14777.5 |
| caax protease self-immunity | SAMN02910377_02541 | Not Available | Negative | 2703647 - 2704375 | 28094.4 |
| hypothetical protein | SAMN02910377_02542 | Not Available | Positive | 2704549 - 2705736 | 44151.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910377_02543 | Not Available | Positive | 2705931 - 2706632 | 25901.5 |
| signal transduction histidine kinase | SAMN02910377_02544 | Not Available | Positive | 2706651 - 2709230 | 98062.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
