Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain ACV-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855782 bp
Thymine Count
828914 bp
Guanine Count
555293 bp
Cytosine Count
522088 bp
Genome Length
2764267 bp
Protein-coding Genes
2522 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | SAMN02910377_00116 | Not Available | Positive | 120355 - 121857 | 55420.8 |
| cold shock protein (beta-ribbon, cspa family) | SAMN02910377_00117 | Not Available | Positive | 122029 - 122232 | 7218.32 |
| transglutaminase-like superfamily protein | SAMN02910377_00118 | Not Available | Positive | 122371 - 123576 | 46254.8 |
| edd domain protein, degv family | SAMN02910377_00119 | Not Available | Positive | 123676 - 124512 | 30546.6 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN02910377_00120 | Not Available | Positive | 124518 - 125723 | 43980.2 |
| dnaj domain-containing protein | SAMN02910377_00121 | Not Available | Positive | 125728 - 126198 | 17518.7 |
| putative efflux protein, mate family | SAMN02910377_00122 | Not Available | Positive | 126176 - 127516 | 48540.4 |
| methyl-accepting chemotaxis protein | SAMN02910377_00123 | Not Available | Negative | 127464 - 129284 | 66638.8 |
| hypothetical protein | SAMN02910377_00124 | Not Available | Positive | 129511 - 129873 | 14149.8 |
| rubrerythrin | SAMN02910377_00125 | Not Available | Negative | 130018 - 130605 | 21970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
