Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00970 | Not Available | Positive | 962846 - 963253 | 13639.4 |
| cytochrome c biogenesis protein transmembrane region | BACCOPRO_00971 | Not Available | Positive | 963268 - 963975 | 25453.2 |
| redox-active disulfide protein 2 | BACCOPRO_00972 | Not Available | Positive | 964009 - 964242 | 8686.94 |
| putative permease | BACCOPRO_00973 | Not Available | Positive | 964259 - 965227 | 35470.7 |
| low molecular weight phosphotyrosine protein phosphatase | BACCOPRO_00974 | Not Available | Positive | 965296 - 965673 | 13865.2 |
| hypothetical protein | BACCOPRO_00975 | Not Available | Positive | 965661 - 965987 | 12148.5 |
| hypothetical protein | BACCOPRO_00976 | Not Available | Positive | 966037 - 967137 | 42375.1 |
| hypothetical protein | BACCOPRO_00977 | Not Available | Positive | 967246 - 968499 | 47179.1 |
| hypothetical protein | BACCOPRO_00978 | Not Available | Positive | 968514 - 969626 | 41870.7 |
| hypothetical protein | BACCOPRO_00979 | Not Available | Positive | 969676 - 970728 | 38043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


