Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00950 | Not Available | Positive | 946249 - 947235 | 38323.8 |
| hypothetical protein | BACCOPRO_00951 | Not Available | Positive | 947293 - 948789 | 56067.7 |
| hypothetical protein | BACCOPRO_00952 | Not Available | Positive | 948882 - 949364 | 17819.6 |
| hypothetical protein | BACCOPRO_00953 | Not Available | Negative | 949339 - 949461 | 4166.85 |
| hypothetical protein | BACCOPRO_00954 | Not Available | Positive | 949501 - 950343 | 32439.9 |
| hypothetical protein | BACCOPRO_00955 | Not Available | Positive | 950364 - 950483 | 4434.6 |
| hypothetical protein | BACCOPRO_00956 | Not Available | Positive | 950510 - 951184 | 25173.4 |
| trna pseudouridine synthase a | BACCOPRO_00957 | Not Available | Positive | 951187 - 951936 | 28831.3 |
| putative dna metabolism protein | BACCOPRO_00958 | Not Available | Negative | 951933 - 952700 | 30201.4 |
| putative dna modification/repair radical sam protein | BACCOPRO_00959 | Not Available | Negative | 952719 - 953984 | 48200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


