Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00930 | Not Available | Negative | 930085 - 930624 | 20924.7 |
| hypothetical protein | BACCOPRO_00931 | Not Available | Positive | 930664 - 931716 | 39844.5 |
| hypothetical protein | BACCOPRO_00932 | Not Available | Positive | 931713 - 932357 | 24817.8 |
| hypothetical protein | BACCOPRO_00933 | Not Available | Positive | 932368 - 932916 | 19925.1 |
| hypothetical protein | BACCOPRO_00934 | Not Available | Positive | 932928 - 933143 | 7999.68 |
| hypothetical protein | BACCOPRO_00935 | Not Available | Positive | 933144 - 933875 | 26716.4 |
| hypothetical protein | BACCOPRO_00936 | Not Available | Positive | 933891 - 934550 | 24619.5 |
| hypothetical protein | BACCOPRO_00937 | Not Available | Positive | 934618 - 934815 | 7120.41 |
| polysaccharide biosynthesis protein | BACCOPRO_00938 | Not Available | Positive | 934916 - 936460 | 58143.1 |
| radical sam domain protein | BACCOPRO_00939 | Not Available | Positive | 936457 - 937557 | 42806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


