Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00819 | Not Available | Positive | 805134 - 805760 | 24214.1 |
| hypothetical protein | BACCOPRO_00820 | Not Available | Positive | 805745 - 806029 | 10411.7 |
| hypothetical protein | BACCOPRO_00821 | Not Available | Negative | 806064 - 806201 | 5142.23 |
| hypothetical protein | BACCOPRO_00822 | Not Available | Negative | 806230 - 807354 | 42058.0 |
| had atpase, p-type, family ic domain protein | BACCOPRO_00823 | Not Available | Negative | 807355 - 808272 | 34479.4 |
| putative magnesium-importing atpase | BACCOPRO_00824 | Not Available | Negative | 808273 - 809956 | 62055.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACCOPRO_00825 | Not Available | Negative | 810086 - 811453 | 52046.7 |
| response regulator receiver domain protein | BACCOPRO_00826 | Not Available | Negative | 811450 - 812136 | 26383.9 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | BACCOPRO_00827 | Not Available | Positive | 812269 - 813177 | 35278.6 |
| putative rrna large subunit m3psi methyltransferase rlmh | BACCOPRO_00828 | Not Available | Negative | 813184 - 813657 | 18201.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


