Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00789 | Not Available | Positive | 775044 - 776174 | 42965.0 |
| hypothetical protein | BACCOPRO_00790 | Not Available | Negative | 776279 - 776584 | 11326.7 |
| hypothetical protein | BACCOPRO_00791 | Not Available | Negative | 776928 - 778304 | 51688.7 |
| tonb family domain protein | BACCOPRO_00792 | Not Available | Positive | 778387 - 779010 | 22982.0 |
| hypothetical protein | BACCOPRO_00793 | Not Available | Positive | 779032 - 780144 | 42070.0 |
| peptidase, s41 family | BACCOPRO_00794 | Not Available | Positive | 780193 - 781551 | 52545.9 |
| hypothetical protein | BACCOPRO_00795 | Not Available | Negative | 781650 - 781835 | 6648.2 |
| hypothetical protein | BACCOPRO_00796 | Not Available | Positive | 781866 - 782261 | 15426.8 |
| hypothetical protein | BACCOPRO_00797 | Not Available | Positive | 782358 - 782666 | 11854.2 |
| hypothetical protein | BACCOPRO_00798 | Not Available | Positive | 782760 - 783110 | 13406.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


