Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00067 | Not Available | Positive | 70530 - 70652 | 4653.58 |
| hypothetical protein | BACCOPRO_00068 | Not Available | Positive | 70634 - 72238 | 61352.5 |
| hypothetical protein | BACCOPRO_00069 | Not Available | Positive | 72275 - 72910 | 23101.8 |
| ompa family protein | BACCOPRO_00070 | Not Available | Negative | 72990 - 73709 | 24416.9 |
| glycine hydroxymethyltransferase | BACCOPRO_00071 | Not Available | Negative | 73747 - 75027 | 46785.4 |
| hypothetical protein | BACCOPRO_00072 | Not Available | Negative | 75070 - 75801 | 27292.9 |
| flavin reductase domain family protein | BACCOPRO_00073 | Not Available | Negative | 75812 - 76180 | 13622.3 |
| flavin reductase domain protein | BACCOPRO_00074 | Not Available | Negative | 76181 - 76402 | 8420.33 |
| aspartate carbamoyltransferase, regulatory subunit | BACCOPRO_00075 | Not Available | Negative | 76407 - 76865 | 17352.2 |
| aspartate carbamoyltransferase | BACCOPRO_00076 | Not Available | Negative | 76888 - 77829 | 36257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


