Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1, beta subunit | BACCOPRO_00779 | Not Available | Positive | 767527 - 769053 | 55717.9 |
| atp synthase, delta/epsilon subunit, beta-sandwich domain protein | BACCOPRO_00780 | Not Available | Positive | 769058 - 769309 | 8783.59 |
| hypothetical protein | BACCOPRO_00781 | Not Available | Positive | 769393 - 769806 | 16547.2 |
| atp synthase f0, a subunit | BACCOPRO_00782 | Not Available | Positive | 769803 - 770873 | 39041.6 |
| atp synthase f0, c subunit | BACCOPRO_00783 | Not Available | Positive | 770920 - 771174 | 8189.59 |
| atp synthase f0, b subunit | BACCOPRO_00784 | Not Available | Positive | 771207 - 771710 | 19239.6 |
| atp synthase f1, delta subunit | BACCOPRO_00785 | Not Available | Positive | 771740 - 772273 | 20393.8 |
| atp synthase f1, alpha subunit | BACCOPRO_00786 | Not Available | Positive | 772290 - 773879 | 57506.5 |
| atp synthase f1, gamma subunit | BACCOPRO_00787 | Not Available | Positive | 773885 - 774769 | 32553.6 |
| hypothetical protein | BACCOPRO_00788 | Not Available | Positive | 774820 - 774999 | 6619.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


