Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00739 | Not Available | Positive | 732133 - 732309 | 6706.08 |
| hypothetical protein | BACCOPRO_00740 | Not Available | Positive | 732296 - 732550 | 10072.2 |
| aspartate--trna ligase | BACCOPRO_00741 | Not Available | Positive | 732612 - 734399 | 67618.2 |
| gtra-like protein | BACCOPRO_00742 | Not Available | Positive | 734540 - 734929 | 15274.1 |
| hypothetical protein | BACCOPRO_00743 | Not Available | Positive | 734988 - 735107 | 4569.71 |
| act domain protein | BACCOPRO_00744 | Not Available | Negative | 735124 - 735549 | 15524.7 |
| hypothetical protein | BACCOPRO_00745 | Not Available | Negative | 735577 - 736818 | 47061.1 |
| hypothetical protein | BACCOPRO_00746 | Not Available | Negative | 737007 - 737132 | 4698.92 |
| hypothetical protein | BACCOPRO_00747 | Not Available | Positive | 737275 - 737646 | 13779.5 |
| alpha-galactosidase | BACCOPRO_00748 | Not Available | Positive | 737709 - 739424 | 64678.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


