Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding helix-turn-helix protein | BACCOPRO_00729 | Not Available | Positive | 728117 - 728410 | 11383.1 |
| hypothetical protein | BACCOPRO_00730 | Not Available | Negative | 728477 - 728767 | 10698.5 |
| hypothetical protein | BACCOPRO_00731 | Not Available | Negative | 728767 - 729516 | 27666.0 |
| hypothetical protein | BACCOPRO_00733 | Not Available | Negative | 729513 - 729761 | 9913.26 |
| dna-binding helix-turn-helix protein | BACCOPRO_00732 | Not Available | Positive | 729706 - 730026 | 11743.4 |
| abi-like protein | BACCOPRO_00734 | Not Available | Negative | 729993 - 730892 | 35412.4 |
| hypothetical protein | BACCOPRO_00735 | Not Available | Positive | 731037 - 731159 | 4530.69 |
| putative dna-binding protein | BACCOPRO_00736 | Not Available | Positive | 731171 - 731614 | 15825.0 |
| hypothetical protein | BACCOPRO_00737 | Not Available | Positive | 731668 - 732015 | 13741.7 |
| hypothetical protein | BACCOPRO_00738 | Not Available | Positive | 731862 - 732194 | 12083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


