Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00699 | Not Available | Negative | 698069 - 699568 | 55770.8 |
| hypothetical protein | BACCOPRO_00700 | Not Available | Negative | 699739 - 700179 | 16993.6 |
| transcriptional regulator, arac family | BACCOPRO_00701 | Not Available | Negative | 700176 - 700664 | 19281.3 |
| hypothetical protein | BACCOPRO_00702 | Not Available | Negative | 700755 - 701825 | 39580.5 |
| gliding motility-associated protein gldm | BACCOPRO_00703 | Not Available | Negative | 701849 - 703210 | 50005.5 |
| gliding motility-associated protein gldl | BACCOPRO_00704 | Not Available | Negative | 703220 - 703639 | 15819.0 |
| hypothetical protein | BACCOPRO_00705 | Not Available | Negative | 703838 - 705106 | 44585.5 |
| hypothetical protein | BACCOPRO_00706 | Not Available | Negative | 705131 - 706363 | 45975.9 |
| hypothetical protein | BACCOPRO_00707 | Not Available | Negative | 706341 - 707105 | 28708.9 |
| hypothetical protein | BACCOPRO_00708 | Not Available | Positive | 707211 - 708110 | 33911.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


