Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00057 | Not Available | Positive | 56885 - 57985 | 41573.5 |
| hypothetical protein | BACCOPRO_00058 | Not Available | Positive | 57957 - 58652 | 26039.8 |
| hypothetical protein | BACCOPRO_00059 | Not Available | Positive | 58760 - 60397 | 61425.0 |
| acyltransferase | BACCOPRO_00060 | Not Available | Negative | 60462 - 61562 | 42118.6 |
| hypothetical protein | BACCOPRO_00061 | Not Available | Positive | 61929 - 62363 | 17049.9 |
| hypothetical protein | BACCOPRO_00062 | Not Available | Positive | 62660 - 63310 | 24590.3 |
| peptidase, s9a/b/c family, catalytic domain protein | BACCOPRO_00063 | Not Available | Negative | 63378 - 65510 | 80229.4 |
| hypothetical protein | BACCOPRO_00064 | Not Available | Negative | 65575 - 66789 | 48380.9 |
| membrane protein insertase, yidc/oxa1 family domain protein | BACCOPRO_00065 | Not Available | Negative | 66947 - 68800 | 71105.0 |
| ctp synthase | BACCOPRO_00066 | Not Available | Negative | 68821 - 70419 | 59979.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


