Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | BACCOPRO_00629 | Not Available | Negative | 629291 - 629701 | 14841.7 |
| transcriptional regulator, hxlr family | BACCOPRO_00630 | Not Available | Positive | 629845 - 630216 | 14000.2 |
| hypothetical protein | BACCOPRO_00631 | Not Available | Positive | 630201 - 630350 | 5400.59 |
| hypothetical protein | BACCOPRO_00632 | Not Available | Negative | 631289 - 632098 | 31719.6 |
| hypothetical protein | BACCOPRO_00633 | Not Available | Negative | 632091 - 632966 | 33995.7 |
| hypothetical protein | BACCOPRO_00635 | Not Available | Negative | 632963 - 633490 | 20093.6 |
| hypothetical protein | BACCOPRO_00634 | Not Available | Positive | 633489 - 633674 | 7483.25 |
| toxin-antitoxin system, antitoxin component, xre family | BACCOPRO_00636 | Not Available | Positive | 633837 - 634157 | 12019.1 |
| hypothetical protein | BACCOPRO_00637 | Not Available | Positive | 634189 - 635259 | 41962.7 |
| hypothetical protein | BACCOPRO_00638 | Not Available | Positive | 635271 - 635516 | 9378.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


