Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00037 | Not Available | Negative | 34791 - 35690 | 35914.3 |
| hypothetical protein | BACCOPRO_00038 | Not Available | Negative | 35683 - 36963 | 49257.2 |
| hypothetical protein | BACCOPRO_00039 | Not Available | Negative | 37220 - 37357 | 5214.26 |
| hypothetical protein | BACCOPRO_00040 | Not Available | Positive | 37885 - 38313 | 16713.5 |
| hypothetical protein | BACCOPRO_00041 | Not Available | Positive | 38307 - 38735 | 16047.8 |
| putative transposase, is4 family | BACCOPRO_00042 | Not Available | Negative | 38961 - 39785 | 32003.3 |
| k+-transporting atpase, a subunit | BACCOPRO_00043 | Not Available | Positive | 40859 - 42565 | 61851.4 |
| k+-transporting atpase, b subunit | BACCOPRO_00044 | Not Available | Positive | 42660 - 44696 | 72842.3 |
| putative k+-transporting atpase, c subunit | BACCOPRO_00045 | Not Available | Positive | 44715 - 45302 | 21331.8 |
| hypothetical protein | BACCOPRO_00046 | Not Available | Positive | 45462 - 46181 | 26542.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


