Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00429 | Not Available | Negative | 433958 - 434749 | 28858.2 |
| copper-exporting atpase | BACCOPRO_00430 | Not Available | Negative | 434787 - 437294 | 90828.0 |
| trka c-terminal domain protein | BACCOPRO_00431 | Not Available | Positive | 437424 - 439112 | 60072.7 |
| hypothetical protein | BACCOPRO_00432 | Not Available | Positive | 439156 - 439340 | 6692.32 |
| hypothetical protein | BACCOPRO_00433 | Not Available | Positive | 439341 - 439534 | 7066.14 |
| hypothetical protein | BACCOPRO_00434 | Not Available | Negative | 439675 - 440940 | 46824.2 |
| spoiid/lytb domain protein | BACCOPRO_00435 | Not Available | Negative | 440943 - 442253 | 49644.7 |
| glycosyltransferase, group 2 family protein | BACCOPRO_00436 | Not Available | Negative | 442269 - 444674 | 91355.5 |
| hypothetical protein | BACCOPRO_00437 | Not Available | Positive | 444786 - 444977 | 7181.78 |
| 23s rrna m2a2503 methyltransferase | BACCOPRO_00438 | Not Available | Positive | 445062 - 446114 | 39397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


