Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00399 | Not Available | Positive | 404182 - 404724 | 21084.5 |
| alpha-l-fucosidase | BACCOPRO_00400 | Not Available | Positive | 404916 - 406421 | 57682.6 |
| redoxin family protein | BACCOPRO_00401 | Not Available | Negative | 406569 - 407041 | 16805.2 |
| hypothetical protein | BACCOPRO_00402 | Not Available | Positive | 407142 - 408122 | 36071.5 |
| tetratricopeptide repeat protein | BACCOPRO_00403 | Not Available | Negative | 408218 - 409666 | 55992.7 |
| glutamine--trna ligase | BACCOPRO_00404 | Not Available | Negative | 409754 - 411532 | 68675.6 |
| hypothetical protein | BACCOPRO_00405 | Not Available | Positive | 411704 - 411826 | 4910.13 |
| hypothetical protein | BACCOPRO_00406 | Not Available | Positive | 411862 - 411990 | 4887.87 |
| hypothetical protein | BACCOPRO_00407 | Not Available | Negative | 411992 - 413128 | 44300.5 |
| hypothetical protein | BACCOPRO_00408 | Not Available | Positive | 413198 - 413338 | 5498.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


