Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00027 | Not Available | Positive | 26987 - 27106 | 4766.87 |
| hypothetical protein | BACCOPRO_00028 | Not Available | Negative | 27167 - 27334 | 5807.95 |
| hypothetical protein | BACCOPRO_00029 | Not Available | Positive | 27405 - 28121 | 27367.1 |
| hypothetical protein | BACCOPRO_00030 | Not Available | Positive | 28228 - 28548 | 12009.6 |
| abi-like protein | BACCOPRO_00031 | Not Available | Negative | 28748 - 29560 | 31714.6 |
| putative dna primase | BACCOPRO_00032 | Not Available | Negative | 29822 - 33106 | 125853.0 |
| hypothetical protein | BACCOPRO_00033 | Not Available | Negative | 33103 - 33288 | 7027.71 |
| hypothetical protein | BACCOPRO_00034 | Not Available | Negative | 33498 - 33851 | 14039.0 |
| hypothetical protein | BACCOPRO_00035 | Not Available | Negative | 33871 - 34062 | 7266.84 |
| hypothetical protein | BACCOPRO_00036 | Not Available | Positive | 34085 - 34702 | 23374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


