Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat protein | BACCOPRO_03900 | Not Available | Positive | 3849627 - 3850638 | 38471.8 |
| transposase, is4 family | BACCOPRO_03901 | Not Available | Positive | 3850639 - 3851274 | 25196.5 |
| hypothetical protein | BACCOPRO_03902 | Not Available | Positive | 3851331 - 3851915 | 22060.3 |
| hypothetical protein | BACCOPRO_03903 | Not Available | Positive | 3852240 - 3852617 | 14425.4 |
| integrase core domain protein | BACCOPRO_03904 | Not Available | Positive | 3852653 - 3853642 | 37758.6 |
| putative threonine--trna ligase | BACCOPRO_03905 | Not Available | Positive | 3853772 - 3854749 | 37358.1 |
| hypothetical protein | BACCOPRO_03906 | Not Available | Negative | 3854750 - 3854984 | 9113.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


