Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03890 | Not Available | Negative | 3842682 - 3843391 | 26924.5 |
| hypothetical protein | BACCOPRO_03891 | Not Available | Negative | 3843392 - 3844285 | 31692.2 |
| is66 family element, transposase | BACCOPRO_03892 | Not Available | Negative | 3844404 - 3846029 | 62931.9 |
| is66 family element, orf2 protein | BACCOPRO_03893 | Not Available | Negative | 3846117 - 3846485 | 14416.6 |
| hypothetical protein | BACCOPRO_03894 | Not Available | Negative | 3846478 - 3846801 | 12437.7 |
| hypothetical protein | BACCOPRO_03895 | Not Available | Negative | 3846862 - 3847552 | 25928.7 |
| hypothetical protein | BACCOPRO_03896 | Not Available | Positive | 3847553 - 3847977 | 16693.7 |
| hypothetical protein | BACCOPRO_03897 | Not Available | Positive | 3848236 - 3848462 | 8641.31 |
| hypothetical protein | BACCOPRO_03898 | Not Available | Negative | 3848463 - 3848960 | 19108.9 |
| rhs repeat-associated core domain protein | BACCOPRO_03899 | Not Available | Positive | 3849078 - 3849615 | 19927.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


