Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03860 | Not Available | Negative | 3822492 - 3823190 | 25910.0 |
| hypothetical protein | BACCOPRO_03861 | Not Available | Positive | 3823305 - 3823787 | 18379.8 |
| transposase, is4 family | BACCOPRO_03862 | Not Available | Positive | 3823825 - 3824280 | 17459.4 |
| transposase, is4 family | BACCOPRO_03863 | Not Available | Positive | 3824296 - 3824933 | 25195.4 |
| is66 family element, transposase | BACCOPRO_03864 | Not Available | Negative | 3825050 - 3826897 | 71622.7 |
| hypothetical protein | BACCOPRO_03865 | Not Available | Negative | 3826989 - 3827321 | 13445.5 |
| hypothetical protein | BACCOPRO_03866 | Not Available | Negative | 3827315 - 3827506 | 7180.82 |
| hypothetical protein | BACCOPRO_03867 | Not Available | Negative | 3827507 - 3828029 | 20281.0 |
| hypothetical protein | BACCOPRO_03868 | Not Available | Positive | 3828030 - 3828507 | 17934.7 |
| hypothetical protein | BACCOPRO_03869 | Not Available | Negative | 3828578 - 3828937 | 13877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


