Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03750 | Not Available | Negative | 3705875 - 3706513 | 25431.6 |
| conjugation system atpase, trag family | BACCOPRO_03751 | Not Available | Negative | 3706513 - 3709224 | 104141.0 |
| hypothetical protein | BACCOPRO_03752 | Not Available | Negative | 3709335 - 3709628 | 10591.3 |
| hypothetical protein | BACCOPRO_03753 | Not Available | Negative | 3709640 - 3710017 | 13424.2 |
| hypothetical protein | BACCOPRO_03754 | Not Available | Negative | 3710078 - 3710401 | 11556.5 |
| hypothetical protein | BACCOPRO_03755 | Not Available | Negative | 3710403 - 3710999 | 22933.3 |
| hypothetical protein | BACCOPRO_03756 | Not Available | Negative | 3711090 - 3711977 | 34017.9 |
| hypothetical protein | BACCOPRO_03757 | Not Available | Negative | 3712084 - 3713190 | 41865.3 |
| dna binding domain, excisionase family | BACCOPRO_03758 | Not Available | Negative | 3713168 - 3713566 | 15553.8 |
| hypothetical protein | BACCOPRO_03759 | Not Available | Negative | 3713743 - 3714516 | 29275.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


