Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03720 | Not Available | Positive | 3683290 - 3683505 | 8120.04 |
| single-strand binding family protein | BACCOPRO_03721 | Not Available | Positive | 3683667 - 3684080 | 15105.8 |
| cobq/cobb/mind/para nucleotide binding domain protein | BACCOPRO_03722 | Not Available | Positive | 3684319 - 3685074 | 27385.8 |
| hypothetical protein | BACCOPRO_03723 | Not Available | Positive | 3685081 - 3685335 | 9467.61 |
| hypothetical protein | BACCOPRO_03724 | Not Available | Negative | 3685406 - 3686803 | 54097.2 |
| hypothetical protein | BACCOPRO_03725 | Not Available | Positive | 3686824 - 3687183 | 13881.3 |
| parb-like protein | BACCOPRO_03726 | Not Available | Positive | 3687274 - 3688504 | 47057.3 |
| hypothetical protein | BACCOPRO_03727 | Not Available | Positive | 3688505 - 3689023 | 19893.5 |
| hypothetical protein | BACCOPRO_03728 | Not Available | Negative | 3689078 - 3689236 | 5618.92 |
| hypothetical protein | BACCOPRO_03729 | Not Available | Negative | 3689202 - 3689453 | 9848.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


