Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_03710 | Not Available | Negative | 3675707 - 3676006 | 11327.6 |
| hypothetical protein | BACCOPRO_03711 | Not Available | Negative | 3676003 - 3676169 | 6327.58 |
| hypothetical protein | BACCOPRO_03712 | Not Available | Negative | 3676170 - 3677773 | 61447.3 |
| putative lysozyme | BACCOPRO_03713 | Not Available | Negative | 3677781 - 3678203 | 16326.8 |
| hypothetical protein | BACCOPRO_03714 | Not Available | Positive | 3678371 - 3678838 | 17242.5 |
| hypothetical protein | BACCOPRO_03715 | Not Available | Positive | 3678851 - 3680230 | 52717.4 |
| hypothetical protein | BACCOPRO_03716 | Not Available | Positive | 3680343 - 3680957 | 23236.6 |
| hypothetical protein | BACCOPRO_03717 | Not Available | Positive | 3681002 - 3681535 | 20434.4 |
| hypothetical protein | BACCOPRO_03718 | Not Available | Positive | 3681912 - 3682046 | 5299.41 |
| transcriptional regulator, tetr family | BACCOPRO_03719 | Not Available | Positive | 3682108 - 3682884 | 30174.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


